rs41546314 chr6:29942601 C>T
- Sequence
cctcctcctgctactctcgggggc[C/T]ctggccctgacccagacctgggcg
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells) HCT-116 (colon carcinoma) H1 (embryonic stem cells)
- ASB for transcription factors
- RB_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RB_HUMAN | 2.15 | n/a | 1.33 | n/a | n/a | |||
| CTCF_HUMAN | 0.57 | 1.06 | 1.48 | n/a | No Hit |
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