rs416544 chr17:77512057 G>A
- Sequence
agaggacagtatgaaaaacgtaat[G/A]tgtgcctgtattagaaaggtcaga
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN CREB1_HUMAN COT2_HUMAN FOXP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 1.06 | -1.93 | 2.00 | n/a | No Hit | |||
| CREB1_HUMAN | 1.36 | -0.81 | 2.00 | n/a | No Hit | |||
| COT2_HUMAN | 2.15 | -1.62 | 2.00 | n/a | No Hit | |||
| FOXP1_HUMAN | 2.22 | -2.56 | 2.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.44 | -0.28 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), urinary albumin-to-creatinine ratio