ADASTRA v1.6.10
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rs41705
chr7:121005014
A
>
G
Sequence
ttatcagagaataatcatagagat[A/G]atggcttatttagtattttaaaat
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ATF2_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF2_HUMAN
-0.46
1.56
1.00
4.9·10
-3
1.42
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
ldl cholesterol
,
rheumatoid arthritis
,
simpson-angus scale
,
total cholesterol
GTEx eQTL
Adrenal_Gland
,
Nerve_Tibial
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)