rs417475 chr19:13748048 G>T
- Sequence
ctgcccggcgcgcccttccgcgtc[G/T]ggggacgcggagctgaggacccga
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- HDAC1_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HDAC1_HUMAN | -0.99 | 1.84 | 2.00 | n/a | n/a | |||
| CREB1_HUMAN | -1.84 | 1.84 | 3.00 | n/a | No Hit |
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