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rs421366 chr4:85350085 T>C

Sequence
tattattttttgattctttgatta[T/C]ggccattcttggaggaggaaggtg
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
GATA3_HUMAN ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA3_HUMAN -1.83 1.90 1.000.04 2.00 n/a No Hit
ESR1_HUMAN 0.49 0.88 0.720.04 2.03 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Muscularis

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