ADASTRA v1.6.10
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rs421441
chr1:229219050
T
>
C
Sequence
ttgagacagggtcttactctgtta[T/C]gcaggctggagtgcagtggctcca
ASB in cell types
HEK293 (embryonic kidney)
HEK293T (embryonic kidney)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
1.25
-0.50
4.0·10
-27
1.00
3.67
HEK293T (embryonic kidney)
0.80
-0.19
0.03
0.90
2.04
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5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Colon_Sigmoid
,
Liver
,
Prostate
,
Skin_Sun_Exposed_Lower_leg
,
Stomach
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale