rs421892 chr10:117439528 A>G
- Sequence
tgttatgtagcaatagtgtgttat[A/G]taaccagaacattgacactgggct
- ASB in cell types
- HepG2 (hepatoblastoma) mesenchymal stem cells A549 (lung carcinoma)
- ASB for transcription factors
- CEBPB_HUMAN BCL6_HUMAN NFIL3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | -0.10 | 1.78 | 1.70 | 4.03 | Concordant | |||
| BCL6_HUMAN | -2.56 | 2.27 | 1.50 | n/a | No Hit | |||
| NFIL3_HUMAN | -1.64 | 1.92 | 1.33 | n/a | n/a |
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Motif analysis
