ADASTRA v1.6.10
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rs423692
chr1:153033205
T
>
G
Sequence
ctgactctgactcactaatcctga[T/G]tgccttctctccaaatctggcttt
ASB in cell types
K562 (myelogenous leukemia)
coronary artery smooth muscle
ASB for transcription factors
JUND_HUMAN
ATF3_HUMAN
HMBX1_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUND_HUMAN
0.82
n/a
2.1·10
-5
1.00
1.33
n/a
No Hit
ATF3_HUMAN
2.69
n/a
4.7·10
-4
1.00
2.00
n/a
No Hit
HMBX1_HUMAN
2.25
n/a
0.02
1.00
2.50
n/a
n/a
Items per page:
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Motif analysis
No data available
Genetic associations
GRASP
fasting insulin
,
homa-ir
,
infant head circumference
,
parkinsons disease
,
pericardial fat
,
triglycerides
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Adipose_Visceral_Omentum
,
Esophagus_Mucosa
,
Ovary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)