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rs424001 chr6:13715765 C>T

Sequence
atatgtttgttagaagtgagtcat[C/T]agtttcatcccatattcaagggga
ASB in cell types
coronary artery smooth muscle
ASB for transcription factors
JUN_HUMAN JUND_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN 1.90 -1.54 5.6·10-31.00 1.33 -1.03 Weak Concordant
JUND_HUMAN 1.23 -1.52 0.021.00 1.33 -1.44 Weak Concordant
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Motif analysis

JUN_HUMAN Weak Concordant
JUN_HUMAN pic

Genetic associations

GTEx eQTL Artery_Aorta Esophagus_Mucosa Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Thyroid

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