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rs4248 chr18:4026708 A>T

Sequence
cattttctatttctgattctttgg[A/T]cacacagggactttctgggctatg
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF2_HUMAN IKZF1_HUMAN MTA2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -2.16 2.37 1.009.6·10-6 1.33 n/a n/a
IKZF1_HUMAN -1.90 2.04 1.001.5·10-5 1.33 n/a No Hit
MTA2_HUMAN -1.72 2.05 1.009.7·10-3 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP maternal transmission distortion transmission distortion

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