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rs425530 chr19:43984634 C>T

Sequence
ttgccgttttttaaatgaggattt[C/T]aggaccatcctgatagaattgttt
ASB in cell types
HEK293 (embryonic kidney) GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -1.01 1.33 1.000.03 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP acute lung injury following major trauma homa-b microalbuminuria waist hip ratio
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Coronary Artery_Tibial Brain_Cortex Breast_Mammary_Tissue Colon_Transverse Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Lung Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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