ADASTRA v1.6.10
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rs425989
chr21:29342954
T
>
C
Sequence
tttttttcctttagtagtttacca[T/C]aagggaatttcctttaagtcaacc
ASB in cell types
HEK293 (embryonic kidney)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
1.03
-0.41
4.8·10
-3
1.00
3.24
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
decrease in fev1 (in asthmatic participants)
,
hdl cholesterol
,
height
,
lung function, forced expiratory volume in 1 second (fev1) percent predicted (in asthmatic participants)
,
systolic blood pressure (sbp)
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Tibial
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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