ADASTRA v1.6.10
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rs4262
chr7:93922116
C
>
T
Sequence
gcggctccgctgccagagctagcc[C/T]gagcccggttctggggcgaaaatg
ASB in cell types
HEK293 (embryonic kidney)
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
0.90
-0.06
4.3·10
-16
1.00
1.89
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
EMBL-EBI
heart rate variability traits (pvrsa/hf)
,
heart rate variability traits (sdnn)
GRASP
birth weight
,
hdl cholesterol
,
hypertension (early onset hypertension)
,
ldl cholesterol
,
simpson-angus scale
,
total cholesterol
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale