ADASTRA v1.6.10
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rs4267626
chr3:153704366
T
>
C
Sequence
tgtaaatatagatgatgctttgct[T/C]actcaactattgctcacaccctgc
ASB in cell types
foreskin keratinocyte
22RV1 (prostate carcinoma)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
-0.42
1.78
1.00
0.01
2.00
22RV1 (prostate carcinoma)
1.17
-0.46
0.04
1.00
1.00
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5
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Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
cystatin c in serum
,
hdl cholesterol
,
serum creatinine
GTEx eQTL
Nerve_Tibial
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale