rs4271522 chr14:49975122 C>T
- Sequence
tcaagagctcctgctgctttggcc[C/T]ctcaaggcactgggattatataaa
- ASB in cell types
- T47D (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.49 | -0.35 | 1.67 | n/a | No Hit | |||
| ESR1_HUMAN | 1.60 | -0.56 | 1.64 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Cells_Cultured_fibroblasts, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg