rs4278737 chr16:88559145 A>G
- Sequence
ggagaaagtcgggcccaaggcccc[A/G]gcaagaggccagcccttgacagct
- ASB in cell types
- foreskin keratinocyte HepG2 (hepatoblastoma)
- ASB for transcription factors
- NFIA_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIA_HUMAN | n/a | 3.74 | 2.00 | 3.40 | Concordant | |||
| CTCF_HUMAN | 0.10 | 1.58 | 1.82 | 0.00 | Weak Discordant |
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Motif analysis
