rs428236 chr6:94324062 T>C
- Sequence
actgatctgacagaagggggagct[T/C]aggaggtagtgtgagtgattggga
- ASB in cell types
- 22RV1 (prostate carcinoma) NB69 (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.60 | 1.88 | 1.33 | 1.91 | Weak Concordant |
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Motif analysis
