rs4287140 chr1:181430547 G>A
- Sequence
gtgcaagttcccatggagcccact[G/A]tgtacatgcccgaaaagaggagga
- ASB in cell types
- GM12878 (female B-cells) L1236 (Hodgkin lymphoma)
- ASB for transcription factors
- ARNT_HUMAN NFKB1_HUMAN MTA2_HUMAN HTF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARNT_HUMAN | -2.53 | 2.35 | 1.33 | n/a | No Hit | |||
| NFKB1_HUMAN | -3.21 | 2.36 | 1.50 | n/a | No Hit | |||
| MTA2_HUMAN | -1.66 | 1.45 | 1.33 | n/a | n/a | |||
| HTF4_HUMAN | -2.28 | 2.10 | 1.33 | n/a | No Hit | |||
| MEF2B_HUMAN | -1.63 | 1.42 | 1.33 | n/a | No Hit |
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