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rs42980 chr16:11201290 T>C

Sequence
ctggggctggagaggctgtgagga[T/C]gtgagtccttggaaattagagatc
ASB in cell types
K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.65 -0.12 9.4·10-60.95 2.00
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Motif analysis

No data available

Genetic associations

GRASP eye color hdl cholesterol ldl cholesterol refractive error resistance to kuru in aged women despite likely exposure total cholesterol vitiligo
GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Nucleus_accumbens_basal_ganglia Nerve_Tibial Thyroid

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