ADASTRA v1.6.10
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rs42980
chr16:11201290
T
>
C
Sequence
ctggggctggagaggctgtgagga[T/C]gtgagtccttggaaattagagatc
ASB in cell types
K562 (myelogenous leukemia)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
0.65
-0.12
9.4·10
-6
0.95
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
eye color
,
hdl cholesterol
,
ldl cholesterol
,
refractive error
,
resistance to kuru in aged women despite likely exposure
,
total cholesterol
,
vitiligo
GTEx eQTL
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Brain_Cortex
,
Brain_Nucleus_accumbens_basal_ganglia
,
Nerve_Tibial
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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