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rs429898 chr5:14009814 T>C

Sequence
aaacagtgtttacaaagatgtgcc[T/C]gagtgaacagaaaaccgaaaatat
ASB in cell types
A549 (lung carcinoma) breast tumor tissue
ASB for transcription factors
FOXA1_HUMAN MAFK_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 2.04 0.12 4.8·10-50.57 2.00 n/a No Hit
MAFK_HUMAN 2.22 n/a 7.7·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Coronary Brain_Cerebellum Brain_Cortex Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Lung Minor_Salivary_Gland Nerve_Tibial Pancreas Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach Testis Thyroid

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