rs43111 chr7:88227200 A>G
- Sequence
caataacaacagtattaaacacac[A/G]tacaggtaaatatttgacattcct
- ASB in cell types
- A549 (lung carcinoma) ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- JUN_HUMAN CEBPB_HUMAN BCL3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.17 | 1.36 | 2.00 | n/a | No Hit | |||
| CEBPB_HUMAN | -0.84 | 1.37 | 2.00 | n/a | No Hit | |||
| BCL3_HUMAN | -0.71 | 1.03 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis