rs4320932 chr11:2150371 T>C
- Sequence
ttcattagctggaggaataggaca[T/C]ctagtggggacaacaaggatttca
- ASB in cell types
- A549 (lung carcinoma) SH-SY5Y (neuroblastoma) HCT-116-RAD21-mAC liver
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.99 | 2.03 | 1.77 | n/a | n/a | |||
| SMC3_HUMAN | -0.04 | 1.73 | 1.89 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, coronary artery disease (cad), height, ldl cholesterol, neuroblastoma (brain cancer), serum creatinine, sporadic creutzfeldt-jakob disease, urinary albumin-to-creatinine ratio