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rs4334415 chr19:12985471 A>G

Sequence
tgcagggacatgcggactgagtat[A/G]tcagtgtgcctctgctggccagtg
ASB in cell types
HEK293 (embryonic kidney) GM12878 (female B-cells)
ASB for transcription factors
CTCF_HUMAN FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.37 0.79 0.981.2·10-3 1.31 n/a No Hit
FOXK2_HUMAN 1.48 -1.10 0.041.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight ldl cholesterol mitral annular calcium obesity with early age of onset (age >2) serum creatinine total cholesterol triglycerides change with statins waist hip ratio
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis

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