rs4349173 chr16:46390834 G>A
- Sequence
atggaatcgaatggaatcatcatc[G/A]aatggaatcgaatggaatcatcaa
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- CTCF_HUMAN ZN331_HUMAN NCOA3_HUMAN JUND_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.01 | n/a | 4.25 | n/a | No Hit | |||
| ZN331_HUMAN | 1.32 | n/a | 4.00 | n/a | No Hit | |||
| NCOA3_HUMAN | 1.14 | n/a | 4.00 | n/a | n/a | |||
| JUND_HUMAN | 1.06 | n/a | 4.00 | n/a | No Hit | |||
| TF65_HUMAN | 1.23 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
