rs435119 chr6:33019058 G>C
- Sequence
tgcccattggcacacgagggcatg[G/C]agagtgttctctatggagaagtag
- ASB in cell types
- GM12878 (female B-cells) periferal blood macrophages
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN ZN687_HUMAN BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -0.53 | 3.31 | 1.89 | n/a | No Hit | |||
| IKZF2_HUMAN | -3.34 | 2.86 | 1.33 | n/a | n/a | |||
| ZN687_HUMAN | -3.25 | 2.76 | 1.33 | n/a | n/a | |||
| BHE40_HUMAN | -2.42 | 2.47 | 1.33 | n/a | No Hit | |||
| MEF2B_HUMAN | -2.38 | 2.18 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood