rs435581 chr8:9171903 A>G
- Sequence
agataaaaccagagatggctgggc[A/G]ggcggaaggaaacgagcccagcaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ERR1_HUMAN MEIS2_HUMAN COT1_HUMAN RING2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERR1_HUMAN | n/a | 3.53 | 2.00 | n/a | No Hit | |||
| MEIS2_HUMAN | n/a | 3.26 | 2.00 | n/a | No Hit | |||
| COT1_HUMAN | n/a | 2.87 | 2.00 | n/a | No Hit | |||
| RING2_HUMAN | -2.21 | 2.29 | 2.00 | n/a | n/a | |||
| MGAP_HUMAN | n/a | 2.11 | 2.00 | n/a | n/a |
Items per page:
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Motif analysis
No data available
Genetic associations
GRASP autism, body mass index (bmi), diastolic blood pressure (dbp), hdl cholesterol, height, mitral annular calcium, parkinsons disease, premature ovarian failure, serum creatinine, systolic blood pressure (sbp), triglycerides, variant creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Brain_Substantia_nigra, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Uterus, Whole_Blood