rs436621 chr1:153033016 A>G
- Sequence
ttgtccagaaggcatctgatgctc[A/G]cattaggagggtgaagggctgccc
- ASB in cell types
- coronary artery smooth muscle
- ASB for transcription factors
- JUND_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUND_HUMAN | 1.88 | -2.11 | 1.33 | n/a | No Hit | |||
| CTCF_HUMAN | 0.59 | 0.43 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Esophagus_Mucosa, Ovary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis