rs4366668 chr15:65611060 G>A
- Sequence
cttcacctgtaaccccaacaagca[G/A]cgaaaggcagtcccgggccctcgg
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells) keratinocytes
- ASB for transcription factors
- SNAI2_HUMAN CTCF_HUMAN E4F1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 1.90 | n/a | 1.50 | n/a | No Hit | |||
| CTCF_HUMAN | 0.50 | 0.56 | 1.24 | n/a | No Hit | |||
| E4F1_HUMAN | n/a | 1.72 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP mean corpuscular hemoglobin concentration (mchc), mean corpuscular volume (mcv), prop taste detection threshold
GTEx eQTL Adipose_Visceral_Omentum, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Ovary, Pituitary, Skin_Sun_Exposed_Lower_leg, Thyroid