rs4377257 chr19:51391128 T>G
- Sequence
cagcccctccttcttcagaccccg[T/G]actctggttccccagcccccttcc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NCOA2_HUMAN NFIC_HUMAN IKZF1_HUMAN ENL_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOA2_HUMAN | 3.26 | 0.14 | 2.00 | n/a | n/a | |||
| NFIC_HUMAN | 2.42 | -3.68 | 2.00 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.77 | -0.80 | 2.00 | n/a | No Hit | |||
| ENL_HUMAN | 1.61 | -1.38 | 2.00 | n/a | n/a | |||
| ZN316_HUMAN | 1.63 | -1.20 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Adrenal_Gland, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Substantia_nigra, Cells_EBV-transformed_lymphocytes, Lung, Pituitary, Small_Intestine_Terminal_Ileum, Spleen, Whole_Blood