rs4377733 chr5:91280763 C>T
- Sequence
gggggcggcgtcgcctcctcgcgc[C/T]gccaaggccccctgcagtcacaca
- ASB in cell types
- CD14+ monocytes A549 (lung carcinoma)
- ASB for transcription factors
- STAT1_HUMAN JUN_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -3.32 | 2.32 | 2.50 | n/a | No Hit | |||
| JUN_HUMAN | 1.05 | -0.20 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.96 | 0.24 | 1.12 | -0.65 | Weak Concordant |
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Motif analysis
