Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs438852 chr6:149473397 A>G

Sequence
tatatttacagctgggagtgaacc[A/G]tttcctatggctctgccctttgca
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 1.75 -2.05 3.3·10-31.00 1.50 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol change with statins neuroticism refractive error rheumatoid arthritis suicide attempts in bipolar disorder (substance free) total cholesterol total cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Coronary Artery_Tibial Brain_Putamen_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Lung Muscle_Skeletal Nerve_Tibial Ovary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Vagina Whole_Blood

Download