rs438996 chr11:5475088 T>C
- Sequence
caaatcctgaatatttttctgctt[T/C]actgacgtcttaccagtcctacag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | -1.81 | 1.87 | 1.33 |
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Motif analysis
No data available
Genetic associations
GRASP college completion, fasting blood glucose, hdl cholesterol, homa-ir, ldl cholesterol, total cholesterol