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rs4420 chr22:42665731 A>G

Sequence
acatgctctgctcttgctctcttc[A/G]aggtaacagattcttgtccgtttg
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
BHE40_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BHE40_HUMAN 1.86 -1.50 0.011.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP infant head circumference variant creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Stomach Testis Thyroid Whole_Blood

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