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rs443345 chr1:109306632 A>G

Sequence
aacaccatcactgacttctcagct[A/G]aaacacaaaaacttagcagggaca
ASB in cell types
K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.28 0.56 0.874.9·10-3 1.31
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Motif analysis

No data available

Genetic associations

GRASP bipolar disorder chronic kidney disease college completion coronary artery disease (cad) cystatin c in serum ldl cholesterol serum creatinine total cholesterol
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Coronary Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Spinal_cord_cervical_c-1 Brain_Substantia_nigra Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Lung Minor_Salivary_Gland Muscle_Skeletal Nerve_Tibial Ovary Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Stomach Testis Thyroid Uterus Whole_Blood

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