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rs444248 chr14:45868545 G>C

Sequence
tggttcttactcattttggccaga[G/C]ttagcttgtgggaaccaaaactgt
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF2_HUMAN TBX21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 1.51 -1.16 0.011.00 1.42 n/a n/a
TBX21_HUMAN 1.83 -1.49 0.051.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol ldl cholesterol lp-pla2 activity microalbuminuria total cholesterol
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia Skin_Sun_Exposed_Lower_leg

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