rs445678 chr8:26577755 C>T
- Sequence
agcgcgggcgctcgcgccgcctgc[C/T]gcccccggccgttcactgccgcat
- ASB in cell types
- foreskin keratinocyte CD14+ monocytes breast tumor tissue neutrophils
- ASB for transcription factors
- CTCF_HUMAN ESR1_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.33 | 1.43 | 1.62 | 1.18 | Weak Concordant | |||
| ESR1_HUMAN | n/a | 2.51 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 0.53 | 2.74 | 1.75 | n/a | No Hit |
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Motif analysis
