ADASTRA v1.6.10
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rs447003
chr12:52454608
T
>
C
Sequence
ctctttgttttctttgcctcacaa[T/C]aaaatgctactagttgaccttgtc
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN
ANDR_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN
2.71
-0.50
8.9·10
-10
1.00
1.50
n/a
No Hit
ANDR_HUMAN
1.27
-0.34
0.03
1.00
1.33
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
aspirin-exacerbated respiratory disease
,
percent decrease of forced expiratory volume (fev) for 1 month after aspirin challenge
,
triglycerides
GTEx eQTL
Breast_Mammary_Tissue
,
Esophagus_Mucosa
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)