rs447760 chr12:44948952 A>G
- Sequence
gcaggctgccctctggaggccgtg[A/G]aaggaaagggctccagggatgttc
- ASB in cell types
- K562 (myelogenous leukemia) foreskin keratinocyte epidermal keratinocytes CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN NCOR1_HUMAN ENL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.91 | -3.64 | 2.50 | n/a | No Hit | |||
| NCOR1_HUMAN | -0.23 | 1.92 | 2.00 | n/a | n/a | |||
| ENL_HUMAN | -1.42 | 1.86 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg