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rs447804 chr15:90818706 G>C

Sequence
gccacttctccctccgtgcagctg[G/C]cacagccccgtgtgtcctcaaagc
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
MEF2B_HUMAN SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN -1.40 1.19 1.000.04 1.33 n/a No Hit
SMCA4_HUMAN n/a 1.59 1.000.04 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol total cholesterol
GTEx eQTL Whole_Blood

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