rs44809 chr15:67943948 C>T
- Sequence
tgcccagccacttgctcttgtgac[C/T]tcatcctgacctgaagcgtctgcc
- ASB in cell types
- LHSAR (prostate epithelial cells) BEAS-2B (bronchial epithelium) VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.29 | 0.05 | 1.50 | n/a | No Hit | |||
| GCR_HUMAN | 1.97 | -1.62 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP asthma, cystatin c in serum, fasting insulin, homa-b, homa-ir, late onset alzheimers disease, refractive error, sporadic creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Testis