Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs451354 chr16:11975923 A>G

Sequence
gccatatcttaaaacctaattcag[A/G]tcgtatcactcctctgcttgagtc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
SMCE1_HUMAN REQU_HUMAN SMCA4_HUMAN TIF1A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCE1_HUMAN 2.93 n/a 1.4·10-41.00 2.00 n/a n/a
REQU_HUMAN 2.33 -1.93 6.7·10-41.00 2.00 n/a n/a
SMCA4_HUMAN 2.20 -0.47 0.010.76 2.00 n/a n/a
TIF1A_HUMAN 1.76 -0.87 0.020.93 2.00 n/a n/a
BCOR_HUMAN 2.46 n/a 0.031.00 2.00 n/a n/a
Items per page:
1 – 5 of 5

Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Coronary Artery_Tibial Brain_Cerebellum Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Spleen Stomach Thyroid Uterus Whole_Blood

Download