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rs452841 chr21:41957602 G>A

Sequence
atgctggtggtggagatgagaatt[G/A]tctgttggatgatctctgctgagt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
SMRC2_HUMAN ARI1B_HUMAN REQU_HUMAN MNT_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC2_HUMAN n/a 2.69 1.001.2·10-4 1.33 n/a n/a
ARI1B_HUMAN n/a 0.91 1.001.5·10-3 1.33 n/a n/a
REQU_HUMAN -1.38 1.67 1.003.7·10-3 1.33 n/a n/a
MNT_HUMAN -0.13 1.44 1.000.02 1.33 n/a n/a
IKZF1_HUMAN 0.03 1.30 1.000.04 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Lung Skin_Not_Sun_Exposed_Suprapubic Testis Thyroid

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