ADASTRA v1.6.10
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adastra.autosome.org
rs453034
chr5:153988605
T
>
G
Sequence
cagattccatatgtgagaacttgg[T/G]gtgagcccccctccccttgggact
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ARI1B_HUMAN
MTG16_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ARI1B_HUMAN
2.88
n/a
1.1·10
-4
1.00
2.00
n/a
n/a
MTG16_HUMAN
2.14
-1.70
0.02
1.00
2.00
n/a
n/a
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Motif analysis
No data available
Genetic associations
GRASP
birth weight
,
hdl cholesterol
,
ldl cholesterol
,
refractive error
GTEx eQTL
Brain_Caudate_basal_ganglia
,
Brain_Frontal_Cortex_BA9
,
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2(Alt/Ref motif p-value)