rs453922 chr17:78130526 T>C
- Sequence
acccggaccagtggaccctagggc[T/C]gcaggagaccaggccctgactcct
- ASB in cell types
- K562 (myelogenous leukemia) cranial neural crest cells GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN KDM1A_HUMAN COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -1.91 | 1.84 | 1.33 | n/a | n/a | |||
| KDM1A_HUMAN | -0.81 | 1.81 | 2.00 | n/a | n/a | |||
| COT1_HUMAN | 0.38 | 2.22 | 1.78 | n/a | No Hit |
Items per page:
1 – 3 of 3