ADASTRA v1.6.10
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rs453964
chr14:68863518
T
>
G
Sequence
ccttcatgggggcttactggacac[T/G]gggttagttcttttatcctagtag
ASB in cell types
A549 (lung carcinoma)
pancreas
ASB for transcription factors
RAD21_HUMAN
SMC3_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
1.58
0.07
6.6·10
-8
1.00
1.88
n/a
n/a
SMC3_HUMAN
1.27
-0.50
3.5·10
-4
1.00
2.09
n/a
n/a
Items per page:
5
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Motif analysis
No data available
Genetic associations
GRASP
total cholesterol
GTEx eQTL
Esophagus_Muscularis
,
Nerve_Tibial
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)