rs454245 chr1:153059503 C>A
- Sequence
accccttctgagaacaccgcattc[C/A]aacaggaggcttatcacaccagtg
- ASB in cell types
- K562 (myelogenous leukemia) LHSAR (prostate epithelial cells)
- ASB for transcription factors
- ANDR_HUMAN IKZF1_HUMAN TEAD4_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.15 | -0.83 | 1.50 | n/a | No Hit | |||
| IKZF1_HUMAN | 2.27 | -2.89 | 2.00 | n/a | No Hit | |||
| TEAD4_HUMAN | 1.66 | n/a | 2.50 | -5.23 | Concordant | |||
| KDM1A_HUMAN | 1.80 | -2.13 | 2.00 | n/a | n/a |
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Motif analysis
