ADASTRA v1.6.10
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rs454421
chr19:45341392
C
>
T
Sequence
aattggattgctggtagcacttta[C/T]gaccaagagctagtgcgactgtag
ASB in cell types
HEK293 (embryonic kidney)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
0.16
0.96
1.00
8.6·10
-31
1.75
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
hdl cholesterol change with statins
,
major depressive disorder (narrow definition)
,
major depressive disorder (narrow definition) (females)
,
total cholesterol
,
variant creutzfeldt-jakob disease
GTEx eQTL
Brain_Anterior_cingulate_cortex_BA24
,
Brain_Caudate_basal_ganglia
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Pituitary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
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