rs45482297 chr6:35297758 G>A
- Sequence
aatgtgcaggcaggtggtgctctc[G/A]ctccaccacggcacctctgcggtc
- ASB in cell types
- T47D (invasive ductal carcinoma) neutrophils
- ASB for transcription factors
- RAD21_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.38 | -1.31 | 1.33 | n/a | n/a | |||
| ESR1_HUMAN | 1.81 | -3.74 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Cells_Cultured_fibroblasts, Colon_Transverse, Lung, Nerve_Tibial, Small_Intestine_Terminal_Ileum, Thyroid, Whole_Blood