rs455186 chr8:17912699 A>T
- Sequence
attaccaccggccattctcttgga[A/T]tcatgactggggatggcaaccccg
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | -0.55 | 1.55 | 1.96 | n/a | n/a | |||
| CTCF_HUMAN | 0.05 | 1.11 | 1.67 | n/a | No Hit | |||
| SMC3_HUMAN | -0.18 | 1.20 | 1.92 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellum, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial