rs4554449 chr8:41097042 G>A
- Sequence
cagctctcttaaaatatgttcgca[G/A]ttcgctcattcattcattcaacaa
- ASB in cell types
- foreskin keratinocyte neural cell A549 (lung carcinoma) SK-N-SH (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN TTP_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.45 | 1.48 | 1.61 | n/a | No Hit | |||
| TTP_HUMAN | 2.22 | -2.06 | 2.00 | n/a | n/a | |||
| SMC3_HUMAN | 0.43 | 1.63 | 1.88 | n/a | n/a |
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